Data · dataset · 2024
The 16S rRNA amplicon sequencing dataset includes 48 samples of intestinal contents from 17 bird species in the Beijing Capital International Airport area
Listed in ScienceDB
All wild animal sequencing samples utilized in this study were obtained from bird mortality incidents at Beijing Capital International Airport (N40°04′21″, E116°35′51″) from April to June 2020.
Description
Individual birds that were beyond recovery and nearing death were selected for sampling within 1 h of their demise in a Biosafety Level II Laboratory. The sampling procedures adhered to the experimental animal care and use guidelines of the Institute of Zoology, Chinese Academy of Sciences.
In brief, the bird strike samples were transported to the Institute of Zoology, Chinese Academy of Sciences, for colonic content sampling, then rapidly frozen using liquid nitrogen and stored in a −80°C freezer for subsequent DNA extraction. A total of 48 colonic samples from 17 bird species were collected. Based on dietary preferences, the 17 bird species were divided into four groups for comparative analysis:1.
Read the rest (2 more)
Omnivores (facultative scavenging birds): carrion crow (Corvus corone, Ccor, n=6), rook (Corvus frugilegus, Cfru, n=3), and black kite (Milvus migrans, Mmig, n=1).2. Omnivores (non-scavenging birds): common pheasant (Phasianus colchicus, Pcol, n=2).3. Carnivores (predatory birds): northern goshawk (Accipiter gentilis, Agen, n=1), eastern buzzard (Buteo japonicus, Bjap, n=1), steppe eagle (Aquila nipalensis, Anip, n=3), upland buzzard (Buteo hemilasius, Bhem, n=3), long-legged buzzard (Buteo rufinus, Bruf, n=2), common kestrel (Falco tinnunculus, Ftin, n=2), saker falcon (Falco cherrug, Fche, n=3), peregrine falcon (Falco peregrinus, Fper, n=4), tawny wood owl (Strix aluco, Salu, n=1), spotted owlet (Athene brama, Abra, n=3), and gray-faced buzzard (Butastur indicus, Bind, n=1).4.
Herbivores: rock pigeon (Columba livia, Cliv, n=6) and budgerigar (Melopsittacus undulatus, Mund, n=6).
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.j00139.00122 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Bioinformatics and computational biology 71% · Sequencing 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.j00139.00122 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (71%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |