Omics · study · 2026
A small RNA sequencing dataset from multiple tissues of Orestias ascotanensis collected at two seasonal time points
Listed in NCBI GEO
This study presents a small RNA sequencing (small RNA-seq) dataset from the Andean killifish Orestias ascotanensis, an extremophile teleost endemic to the Ascotán Salt Pan in the Chilean Altiplano.
Description
The dataset includes 42 libraries generated from gills, skin, and muscle tissues of 14 adult individuals sampled in summer and winter. Small RNA libraries were prepared using the Illumina TruSeq Small RNA Library Preparation Kit and sequenced on an Illumina NextSeq 500 platform
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE319nnn/GSE319321 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE319321 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1404325 ncbi.nlm.nih.gov/bioproject/PRJNA1404325 ↗
project · from NCBI GEO
Topics
- Stated by source
- Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Evolutionary biology 74% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE319321 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3104 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (74%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |