Omics · study · 2026
Cell‑type‑specific gene expression profiling in Stevia rebaudiana leaves by single‑nucleus RNA sequencing
Listed in NCBI GEO
Stevia rebaudiana (stevia) is a plant that accumulates high levels of steviol glycosides (SGs) in its leaves, which provide strong sweetness.
Description
In this study, we used single‑nucleus RNA sequencing (snRNA‑seq) to resolve the expression landscape of SG‑biosynthetic genes across individual cell types in stevia leaves. We identified distinct nuclear clusters corresponding to different cell types such as mesophyll, epidermis, trichomes and vascular bundle sheath.
Notably, UGT76G‑family and UGT91D4 sugar‑transferase genes showed high expression in mesophyll and epidermal nuclei, suggesting spatial division of SG production within leaf tissues.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE311nnn/GSE311951 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE311951 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1371983 ncbi.nlm.nih.gov/bioproject/PRJNA1371983 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Genetics 69% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE311951 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3105 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |