Data · dataset · 2025
AIMD. AI for microscopy denoising - dataset 1
Listed in Hamburger Zentrum für Sprachkorpora Korpus Repositorium
Description
The dataset contains the first of two processed open-source datasets used in the Github repository: github.com/IPMI-ICNS-UKE/AIMD.AI-for-microscopy-denoising The AIMD Github repository is demonstrating the use of open-source microscopy data for deep learning based image denoising and transfer learning as showcased in: Lohr, D., Meyer, L., Woelk, LM., Kovacevic, D., Diercks, BP., Werner, R. (2025). Deep Learning-Based Image Restoration and Super-Resolution for Fluorescence Microscopy: Overview and Resources.
In: Diercks, BP. (eds) T Cell Activation. Methods in Molecular Biology, vol 2904.
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Humana, New York, NY. doi.org/10.1007/978-1-0716-4414-0_3 The folder models contains pre-trained denoising models generated using the code of the AIMD repository. The original open-source data is the "Fluorescence Microscopy Denoising (FMD) dataset" - CC BY-SA 4.0 license curate.nd.edu/articles/dataset/Fluorescence_Microscopy_Denoising_FMD_dataset/24744648 8 bit image data, filetype: png
Links
Where it is published
- fdr.uni-hamburg.de /record/16868 ↗
Hamburger Zentrum für Sprachkorpora Korpus Repositorium record
landing page · from fdr uni hamburg de
- DOI doi.org/10.25592/uhhfdm.16868 ↗
DOI / persistent id · from fdr uni hamburg de
Catalogue records · 1
- InvenioRDM API fdr.uni-hamburg.de/api/records/16868 ↗
metadata API · from fdr uni hamburg de
Topics
- From keywords
- Computer Science & AI
- Inferred from text
- Image 75% · Machine learning 71% · Microscopy 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Hamburger Zentrum für Sprachkorpora Korpus Repositorium | 16868 | 2 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| concepts[field].anzsrc:group:4611 | enrichment · fdr uni hamburg de | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].local:field:computer-science-ai | mapping · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · fdr uni hamburg de | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:microscopy | enrichment · fdr uni hamburg de | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | /metadata/description |
| license | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| publication_date | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | |
| title | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 | /metadata/title |
| updated_date | source · fdr uni hamburg de | connector:fdr_uni_hamburg_de@1.0.0 |