Data · dataset · 2025
Soils' metagenomes (countryside of Sao Paulo - Brazil)
Listed in GBIF
We collected eight soil samples from different locations in the countryside of Sao Paulo (Brazil), assessed the community profiles based on 16S rRNA sequencing and analyzed the soil metagenomes based on shotgun sequencing to identify antibiotic resistance genes.
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006748.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/ce0cfd40-c48d-443e-aad8-35082e2090b2 ↗
landing page · from gbif
- DOI doi.org/10.15468/pc4ehs ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006748 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/ce0cfd40-c48d-443e-aad8-35082e2090b2 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Microbial taxonomy 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | ce0cfd40-c48d-443e-aad8-35082e2090b2 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:field:310409 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (75%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |