Data · dataset · 2022
Evaluating the capabilities and challenges of layer-fMRI VASO at 3T
Listed in IISH Dataverse
Study
Description
Abstract
Sub-millimeter functional imaging at ultrahigh field (UHF) strengths has the potential to capture cortical layer-specific functional information flow within and across brain systems. Recent sequence advancements of fMRI signal readout and contrast generations resulted in wide adaptation of layer-fMRI protocols across the global UHF neuroimaging community. However, most layer-fMRI applications are confined to one of ≈100 privileged UHF imaging centers, and sequence contrasts with unwanted sensitivity to large draining veins.
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In this work, we propose the application of vein-free vascular space occupancy (VASO) sequences at widely accessible 3T scanners. We aim to implement, characterize and apply a CBV-sensitive VASO sequence setup for 3T. We find that the longer T2*, and shorter T1 relaxation times at 3T can account for some of the lower z-magnetization in the inversion-recovery VASO sequence compared to 7T and 9.4T.
Since 3T fMRI does not provide as much SNR compared to 7T, thermal-noise dominated layer-fMRI experiments at 3T require longer scan duration. In order to mitigate unrealistically long experiments, we aimed to increase the readout efficiency compared to previous 7T layer-fMRI VASO. This is done by means of utilizing fat saturation with binomial pulses, and segmented in-plane segmented trajectory, and externalizing phase navigators from the shot-specific readout.
We test the utility of this setup for visual tasks, for motor tasks, and for movie watching tasks. We conclude that layer-fMRI VASO is applicable at 3T without too much further ado. Link to Zip file with all participants (96GB): layerfmri.page.link/3TVASO_groupdata
Links
Where it is published
- Dataverse dataset page dataverse.nl/dataset.xhtml?persistentId=doi%3A10.34894%2FSRT8RU ↗
landing page · from datasets iisg amsterdam
- DOI doi.org/10.34894/srt8ru ↗
DOI / persistent id · from datasets iisg amsterdam
Catalogue records · 1
- Dataverse API dataverse.nl/api/datasets/:persistentId/?persistentId=doi%3A10.34894%2FSRT8… ↗
metadata API · from datasets iisg amsterdam
Topics
- Stated by source
- Medicine, Health and Life Sciences · Physics
- From keywords
- Life Sciences · Medicine & Health · Physics
- Inferred from text
- Condensed matter physics 69% · Imaging 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| IISH Dataverse | doi:10.34894/SRT8RU | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:5104 | enrichment · datasets iisg amsterdam | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].dataverse_subject:physics | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[field].local:field:physics | mapping · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /subjects |
| concepts[modality].local:modality:imaging | enrichment · datasets iisg amsterdam | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| description | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /description |
| publication_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| title | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | /name |
| updated_date | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 | |
| version_label | source · datasets iisg amsterdam | connector:datasets_iisg_amsterdam@1.0.0 |