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Omics · study · 2026

GAR1, a DNA Binding Gibberellin Receptor, Directly Activates Gene Expression to Regulate Rice Height and Fertility

Listed in NCBI GEO

Gibberellins (GAs) regulate multiple aspects of growth and development in flowering plants, primarily through the canonical GID1-DELLA signaling module.

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Contrary to the prevailing paradigm that all GA responses require GID1, we demonstrated that a rice GID1-like 2 protein (designated GA Receptor 1, GAR1) is a GA receptor that functions independently of GID1. Isothermal titration calorimetry revealed that GAR1 can bind bioactive GAs, and multiple assays confirmed that GAR1 physically interacts with the promoter of GAMYB, a central regulator of GA responses, whereas GID1 does not.

Using a transgenic rice line containing the GA biosensor GIBBERELLIN PERCEPTION SENSOR 1 (GPS1), we demonstrated that the subcellular distributions of GAR1 and its homologs GAR3 and GAR4 overlapped with strong GA signals in specific cells of rice leaves, anthers, and filaments. gar1 gar2 double mutants exhibited a semi-dwarf phenotype with slightly shorter anthers, whereas gar3 gar4 mutants displayed normal plant height with elongated filaments; both double mutants showed slightly reduced male fertility.

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ChIP-seq analyses revealed enrichment of GAR1 at the promoters of MYBs and other GA-responsive genes associated with tiller height and anther development, and RT-qPCR confirmed that height-related genes were downregulated in gar1 gar2 double mutants. Our findings reveal a non-canonical GA signaling pathway mediated by GAR1, providing new mechanistic insights into GA perception and novel targets for biotechnological manipulation.

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Life Sciences
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Agricultural biotechnology 69%
Provenance · 1 source records, 7 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE33147312 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].anzsrc:group:3001enrichment · NCBI GEOtaxonomy-embedding@1.1.0title+keywords+description (69%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title