Data · dataset · 2015
Wild-type yeast gene read counts from 48 replicate experiment
Listed in DataCite
These data are RNA-seq read counts for 48 biological replicates of wild-type yeast.
Description
The reads were aligned to the Saccharomyces cerevisiae genome with Tophat and gene counts determined with htseq-count. Reference genome and gene annotations were taken from Ensembl.
See the linked papers for more details and the source for the raw data.
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Wild_type_yeast_gene_read_counts_from_48_repl… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1425503 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1425503 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1425503 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Computer and information sciences
- From keywords
- Bioinformatics and computational biology
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1425503 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |