Data · dataset · 2024
Dnitrification-synT2
Listed in ScienceDB
On March 18, 2024, the synthetic microbial community was resuspended in 7% salinity, low-carbon source 2216E medium to an OD600 of approximately 0.8, followed by the addition of 1.6 mmol/L NO3--N. The culture was incubated in a biochemical incubator at 25°C for 1 hour.
Description
After incubation, the cells were immediately centrifuged at 4,500 r/min for 10 minutes to collect the cell pellets, which were rapidly frozen in liquid nitrogen.
The samples were preserved on dry ice and sent to Novogene Bioinformatics Institute (Novogene Bioinformatics, Beijing, China) for metatranscriptomic sequencing using the Novaseq 6000 sequencing system (library insert size of 350 bp, paired-end sequencing length of 150 bp). Each sample generated 10 Gb of data.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.14427 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Ocean & Atmospheric Science · Social Science
- Inferred from text
- Environmental biotechnology 70% · Sequencing 75%
Provenance · 1 source records, 13 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.14427 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].anzsrc:group:4103 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (70%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |