Data · dataset · 2026
<p>LA accumulation enhances pathogen avoidance.</p>
Listed in ZivaHub
<p><b>(A)</b> Metabolomic analysis.
Description
Animals fed on empty vector or <i>aex-5</i> RNAi were harvested for metabolomic analysis using GC–MS. The top-ranked differentially abundant metabolites were identified, and their relative expression was plotted in a heatmap. <b>(B)</b> Relative linoleic acid content measured by LC–HRMS in wild-type and <i>nhr-68(gk708)</i> mutant animals is shown as a heatmap; each column represents one of three biological replicates. <b>(C)</b> <i>P. aeruginosa</i> occupancy index in wild-type and <i>nhr-68(gk708)</i> animals treated with vehicle or LA at 8 h and 12 <b>h.</b> The occupancy index was calculated as (<i>N</i><sub>on</sub> lawn/<i>N</i><sub>total</sub>).
LA, linoleic acid. The bars represent the means, while the error bars indicate the SDs of three independent experiments (<i>N</i> = 3; <i>n</i> = 90 animals per condition per experiment); ***<i>p</i> < 0.001. <b>(D)</b> Schematic of the PUFA synthesis pathway in <i>C. elegans</i>, adapted from [<a href="plosbiology.org/article/info:doi/10.1371/journal.pbio.3004026#pbio.3004026.ref029" target="_blank">29</a>].
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The diagram depicts all known steps in PUFA synthesis as well as the elongase and desaturase enzymes involved. Abbreviations: PA, palmitic acid; PLA, palmitoleic acid; VA, vaccenic acid; SA, stearic acid; OA, oleic acid; LA, linoleic acid; ALA, alpha-linolenic acid; GLA, gamma-linolenic acid; STA, stearidonic acid; DGLA, dihommo gamma-linolenic acid; ETA, eicosatrienoic acid; AA, arachidonic acid; EPA, eicosapentaenoic acid. <b>(E)</b> <i>P. aeruginosa</i> occupancy index in wild-type and <i>nhr-68(gk708)</i> animals treated with vehicle or VA at 8 h and 12 h.
The occupancy index was calculated as (<i>N</i><sub>on</sub> lawn/<i>N</i><sub>total</sub>). VA, vaccenic acid. The bars represent the means, while the error bars indicate the SDs of three independent experiments (<i>N</i> = 3; <i>n</i> = 90 animals per condition per experiment). <b>(F)</b> qRT–PCR analysis of <i>fat-1</i>, <i>fat-2</i>, <i>fat-3</i> and <i>fat-4</i> in animals fed on <i>E. coli</i>.
Data are presented as the mean ± SD from three independent experiments (<i>N</i> = 3; <i>n</i> = 200 animals per condition per biological replicate). ***<i>p</i> < 0.001, <i>t</i> tes<i>t</i>. <b>(G)</b> GC–MS analysis of linoleic acid abundance in <i>fat-3</i> RNAi animals. Animals fed empty vector or <i>fat-3</i> RNAi were harvested under <i>E. coli</i> or <i>P. aeruginosa</i> conditions and subjected to GC–MS-based metabolomic profiling. <b>(H)</b> Quantification of linoleic acid abundance in control and <i>P. aeruginosa</i>-exposed animals.
Data are presented as mean ± SD. One-way ANOVA was used to determine statistical significance. <i>N</i> = 3; <i>n</i> = 2,000 animals per condition per experiment. <b>(I)</b> <i>P. aeruginosa</i> occupancy indexe of wild-type and <i>nhr-68(gk708)</i> animals fed empty vector control or <i>fat-3</i> RNAi at 8 h and 12 h. <b>(J)</b> <i>P. aeruginosa</i> occupancy indexe of wild-type and <i>nhr-68(gk708)</i> animals fed empty vector control or <i>fat-2</i> RNAi at 8 h and 12 h.
The occupancy index was calculated as (<i>N</i><sub>on</sub> lawn/<i>N</i><sub>total</sub>). Data are presented as mean ± SD from three independent experiments (<i>N</i> = 3; <i>n</i> = 90 animals per condition per experiment). The data underlying this Figure can be found in <a href="plosbiology.org/article/info:doi/10.1371/journal.pbio.3004026#pbio.3004026.s009" target="_blank">S1 Data</a>.</p>
Links
Where it is published
- DOI doi.org/10.1371/journal.pbio.3004026.g004 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Biochemistry and cell biology · Bioinformatics and computational biology · Caenorhabditis elegans · Chemistry · Earth & Environmental Science · Ecology · Genetics · Immunology · Life Sciences · Medicine & Health · Psychology & Behavioral Science · Research, science and technology policy
Provenance · 1 source records, 17 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34026457 | 9 d ago | JSON v1 |
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| concepts[organism].NCBITaxon:6239 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['caenorhabditis elegans </'] |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
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| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |