Omics · study · 2026
Recurrent drought stress triggers transcriptional reprogramming and epigenetic modifications in apple seedlings
Listed in NCBI GEO
Developing multiple stress-tolerant crops is the goal of many breeders in the current context of seasonal variability precipitated by the ongoing climate change.
Description
Among the most pressing stress, drought is becoming a major concern in many regions of the world. Plant responses to drought has been studied in many species, including perennial plants such as apple (Malus domestica); however, the effects of recurrent stress and the potential for stress memory, or priming, remain poorly described.
Priming reflects the capacity of plants to “memorize” environmental stress experiences and potentially improve their responses to recurring stress. Such information may be retained through epigenetic modifications of DNA and associated histone proteins. This ability could enable training of plants to face future challenges.
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In this study, we explored the effects of recurrent drought stress on apple seedling morphology and investigated the transcriptomic and epigenetic changes in plants subjected to this treatment. Our results indicate that naïve apple seedlings can be primed upon first exposure to drought stress, and that primed plants respond differently to recurrent stress later in the season. Analyses of differentially expressed genes and differentially methylated regions further indicate that primed plants’ molecular responses differ significantly from plants exposed to drought stress for the first time.
Finally, our results suggest that following a winter period, the previously induced priming effect may be partially lost. Overall, our study demonstrates the importance of studying recurrent stress to better understand the memory-associated mechanisms leading to morphological and gene expression alterations in perennial plants.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE307nnn/GSE307875 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE307875 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1327471 ncbi.nlm.nih.gov/bioproject/PRJNA1327471 ↗
project · from NCBI GEO
- PubMed 42010401 pubmed.ncbi.nlm.nih.gov/42010401 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Methylation profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE307875 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:methylation-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |