Table · dataset · 2022
yarongef/human_proteome_triplets
Listed in Hugging Face Datasets
Dataset Description Out of 20,577 human proteins (from UniProt human proteome), sequences shorter than 20 amino acids or longer than 512 amino acids were removed, resulting in a set of 12,703 proteins.
Description
The uShuffle algorithm (python pacakge) was then used to shuffle these protein sequences while maintaining their triplet distribution. The sequences for which uShuffle failed to create a shuffled version were eliminated.
Afterwards, h-CD-HIT algorithm (web server) was used with three… See the full description on the dataset page: huggingface.co/datasets/yarongef/human_proteome_triplets.
Links
Where it is published
- Hugging Face dataset page huggingface.co/datasets/yarongef/human_proteome_triplets ↗
landing page · from Hugging Face
Catalogue records · 1
- Hub API huggingface.co/api/datasets/yarongef/human_proteome_triplets ↗
metadata API · from Hugging Face
Topics
- From keywords
- Computer Science & AI
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Hugging Face Datasets | yarongef/human_proteome_triplets | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Hugging Face | connector:huggingface@1.0.0 | /gated |
| concepts[field].local:field:computer-science-ai | mapping · Hugging Face | connector:huggingface@1.0.0 | |
| concepts[modality].hf_modality:tabular | source · Hugging Face | connector:huggingface@1.0.0 | |
| concepts[modality].hf_modality:text | source · Hugging Face | connector:huggingface@1.0.0 | |
| created_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| description | source · Hugging Face | connector:huggingface@1.0.0 | /description |
| license | source · Hugging Face | connector:huggingface@1.0.0 | /tags[license:*] |
| publication_date | source · Hugging Face | connector:huggingface@1.0.0 | |
| title | source · Hugging Face | connector:huggingface@1.0.0 | /id |
| updated_date | source · Hugging Face | connector:huggingface@1.0.0 |