Constarium
← Search

Omics · dataset · 2021

Wood-boring larvae of longhorned beetles (Coleoptera; Cerambycidae) have evolved a diverse array of plant cell wall degrading enzymes.

Listed in Edmond

Longhorned beetles (Cerambycidae) are the most diverse group of wood-feeding (xylophagous) insects on Earth.

Description

Their larvae feed on woody tissues made up of large amounts of plant cell wall (PCW), which is notoriously recalcitrant to breakdown. To efficiently access nutrients from their food source, cerambycid larvae have to deconstruct PCW polysaccharides - like cellulose, hemicelluloses, and pectin - which requires them to possess an adequate arsenal of plant cell wall degrading enzymes (PCWDEs) present in their digestive tract.

Genomic data for Cerambycidae are mostly limited to notorious forest pests and are lacking for most major taxonomic groups. Consequently, our understanding of the distribution and evolution of cerambycid PCWDEs is quite limited. We documented the numbers, kinds, and evolution of cerambycid PCWDEs by surveying larval midgut transcriptomes from 23 species representing six of the eight recognized subfamilies of Cerambycidae.

Read the rest (1 more)

Using these data, we identified 340 new putative PCWDEs belonging to ten CAZyme families, making this by far the most comprehensive comparative genomic study of cerambycid PCWDEs to date. The wide range of PCWDEs expressed by Cerambycidae should allow them to break down most PCW polysaccharides. The phylogenetic distribution of PCWDEs we observed suggests that cerambycid food sources (e.g., healthy, weakened, or decayed/rotten wood) may not have played a major role in shaping the evolutionary history of these enzyme families encoded in cerambycid genomes.

Links

Where it is published

Catalogue records · 1

Topics

Inferred from text
Genome sequencing 65%
Provenance · 2 source records, 23 field assertions
SourceKeyLast seenRaw
Edmonddoi:10.17617/3.5610 d agoJSON v1
Edmonddoi:10.17617/3.569 d agoJSON v1
FieldAssertionExtractorEvidence
concepts[field].local:field:astronomymapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:chemistrymapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:computer-science-aimapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:earth-environmentalmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:economics-financemapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:engineeringmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:humanitiesmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:life-sciencesmapping · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0/subjects
concepts[field].local:field:life-sciencesmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:materials-sciencemapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:medicine-healthmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:ocean-atmosphericmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:physicsmapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[field].local:field:social-sciencemapping · edmond mpg deconnector:edmond_mpg_de@1.0.0/subjects
concepts[modality].local:modality:genome-sequencingenrichment · edmond mpdl mpg dekeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:rna-seqmapping · edmond mpdl mpg devocabulary-mapper@1.0.0keywords['RNA-Seq']
concepts[modality].local:modality:rna-seqmapping · edmond mpg devocabulary-mapper@1.0.0keywords['RNA-Seq']
created_datesource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0
descriptionsource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0/description
publication_datesource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0
titlesource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0/name
updated_datesource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0
version_labelsource · edmond mpdl mpg deconnector:edmond_mpdl_mpg_de@1.0.0