Data · dataset · 2021
Human breast cancer in situ capturing transcriptomics
Listed in Teesside University Research Data Repository
Triplicates from 23 breast cancer patients with luminal a, luminal b, triple-negative, and HER2-positive subtypes.
Description
Please refer to metadata.csv for patient, replicate, and subtype associations. All samples were produced using the protocol described in [1].
[1]: doi.org/10.1126/science.aaf2403 Changes in Version 4 and 5: - Attempt to fix misordered contributors list Changes in Version 3: - Added tumor annotation files Changes in Version 2: - Added indices to spot files - Dropped sample with bad spot data (23901_C1)
Links
Where it is published
- DOI doi.org/10.17632/29ntw7sh4r.5 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Cancer · Earth & Environmental Science · Gene expression · Medicine & Health
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/29ntw7sh4r.5 | 19 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:field:310505 | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['Gene Expression'] |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |