Data · dataset · 2024
18S rDNA amplicon sequencing of NEREA size-fractionated samples
Listed in GBIF
Analysis of the V9 region of 18S rDNA through amplicon sequencing.
Description
Samples were collected monthly across different sampling sites in the Gulf of Naples (Italy). Seawater was collected at different depths and subjected to size fractionation filtering.
The DNA was extracted and amplified by PCR.
Links
Get the data
- Darwin Core Archive hosted-datasets.gbif.org/mgnify/MGYS00006706.zip ↗
download · from gbif
Where it is published
- GBIF dataset page gbif.org/dataset/b5100290-e1af-4701-a5b9-e9c0c770ccd8 ↗
landing page · from gbif
- DOI doi.org/10.15468/gu6cpz ↗
DOI / persistent id · from gbif
Documentation and papers
- Publisher page ebi.ac.uk/metagenomics/studies/MGYS00006706 ↗
documentation · from gbif
Catalogue records · 1
- GBIF API api.gbif.org/v1/dataset/b5100290-e1af-4701-a5b9-e9c0c770ccd8 ↗
metadata API · from gbif
Topics
- From keywords
- Life Sciences
- Inferred from text
- Bioinformatics and computational biology 69% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| GBIF | b5100290-e1af-4701-a5b9-e9c0c770ccd8 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · gbif | connector:gbif@1.0.0 | |
| concepts[field].anzsrc:group:3102 | enrichment · gbif | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · gbif | connector:gbif@1.0.0 | |
| concepts[modality].local:modality:sequencing | enrichment · gbif | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · gbif | connector:gbif@1.0.0 | |
| description | source · gbif | connector:gbif@1.0.0 | /description |
| license | source · gbif | connector:gbif@1.0.0 | |
| publication_date | source · gbif | connector:gbif@1.0.0 | |
| title | source · gbif | connector:gbif@1.0.0 | /title |
| updated_date | source · gbif | connector:gbif@1.0.0 |