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Data · dataset · 2022

Raw expression data for genes related to DNA repair and metabolism

Listed in DataCite

Data: raw expression data (read counts) for 519 genes related to DNA repair and metabolism.

Description

Method

Next Generation Sequencing using Ion Torrent S5XL platform. Samples: peripheral blood mononuclear cells isolated from whole blood samples collected from 8 patients with lower extremity artery disease (LEAD), 7 patients with abdominal aortic aneurysm (AAA), 7 patients with chronic venous disease (CVD) and 7 healthy volunteers (Controls). This dataset was used for publication: Next Generation Sequencing in the Assasment of the Transcriptomic Landscape of DNA Damage Repair Genes in Abdominal Aortic Aneurysm, Chronic Venous Disease and Lower Extremity Artery Disease by Karol P. Ruszel, Daniel P. Zalewski, Andrzej Stępniewski, Dariusz Gałkowski, Jacek Bogucki, Marcin Feldo, Janusz Kocki and Anna Bogucka-Kocka.

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If you use this dataset, please cite our paper. Detailed bibliographic data will be provided after publication of our paper.

Links

Topics

Inferred from text
Disease 75% · Gene expression 80% · Sequencing 75%

Related

Provenance · 1 source records, 13 field assertions
SourceKeyLast seenRaw
DataCite10.6084/m9.figshare.19518010.v111 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
byte_sizesource · DataCiteconnector:datacite@1.0.0
concepts[disease].local:disease:diseaseenrichment · DataCitekeyword-concept-rules@1.0.0title+description (75%)
concepts[field].anzsrc:field:310505enrichment · DataCitetaxonomy-embedding@1.1.0title+keywords+description (80%)
concepts[field].fos:basic-medicinesource · DataCiteconnector:datacite@1.0.0
concepts[field].fos:biological-sciencessource · DataCiteconnector:datacite@1.0.0
concepts[modality].local:modality:sequencingenrichment · DataCitekeyword-concept-rules@1.0.0title+description (75%)
created_datesource · DataCiteconnector:datacite@1.0.0
descriptionsource · DataCiteconnector:datacite@1.0.0/data/attributes/descriptions
licensesource · DataCiteconnector:datacite@1.0.0/data/attributes/rightsList
publication_datesource · DataCiteconnector:datacite@1.0.0/data/attributes/dates
titlesource · DataCiteconnector:datacite@1.0.0/data/attributes/titles/0/title
updated_datesource · DataCiteconnector:datacite@1.0.0