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Structure · dataset · 2026

<p>Model selection workflow with PEtab Select.</p>

Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.1371/journal.pcbi.1014774.g001

<p>(1) The user defines the model selection <b>problem</b>, including the model space and the mathematical description of the set of possible process components, in the <b>standard</b>.

Description

(2) The user runs model selection via a <b>calibration tool</b> by sending the PEtab Select problem to the PEtab Select <b>package</b>, which initiates iterations of model selection. (2a) The package provides model candidates to the calibration tool based on the problem specification and the available calibration results.

(2b) The calibration tool calibrates the proposed candidate models and sends the calibration results to the package. Iterations of (2a) and (2b) continue until the package sends a termination signal to indicate the end of model selection. The results are provided in the PEtab Select model format and include all calibrated models with their calibration results.

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(3) The package can be used to perform subsequent analyses and visualizations of the results.</p>

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Where it is published

Catalogue records · 1

Topics

Provenance · 3 source records, 35 field assertions
SourceKeyLast seenRaw
ZivaHuboai:figshare.com:article/340367627 d agoJSON v1
Deakin Research Onlineoai:figshare.com:article/340367627 d agoJSON v1
DMU Figshareoai:figshare.com:article/340367627 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
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concepts[disease].local:disease:cancermapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Cancer']
concepts[disease].local:disease:cancermapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Cancer']
concepts[field].anzsrc:field:310114mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['systems biology']
concepts[field].anzsrc:field:310114mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['systems biology']
concepts[field].anzsrc:field:310114mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['systems biology']
concepts[field].anzsrc:group:3104mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Evolutionary Biology']
concepts[field].anzsrc:group:3104mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Evolutionary Biology']
concepts[field].anzsrc:group:3104mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Evolutionary Biology']
concepts[field].anzsrc:group:3105mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3105mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3105mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Genetics']
concepts[field].anzsrc:group:3402mapping · figshare dmu ac ukvocabulary-mapper@1.0.0keywords['Inorganic Chemistry']
concepts[field].anzsrc:group:3402mapping · zivahub uct ac zavocabulary-mapper@1.0.0keywords['Inorganic Chemistry']
concepts[field].anzsrc:group:3402mapping · dro deakin edu auvocabulary-mapper@1.0.0keywords['Inorganic Chemistry']
concepts[field].local:field:chemistrymapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:chemistrymapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:chemistrymapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:computer-science-aimapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:computer-science-aimapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:computer-science-aimapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:earth-environmentalmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
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concepts[field].local:field:earth-environmentalmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:life-sciencesmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
concepts[field].local:field:life-sciencesmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:medicine-healthmapping · dro deakin edu auconnector:dro_deakin_edu_au@1.0.0
concepts[field].local:field:medicine-healthmapping · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0
concepts[field].local:field:medicine-healthmapping · figshare dmu ac ukconnector:figshare_dmu_ac_uk@1.0.0
descriptionsource · zivahub uct ac zaconnector:zivahub_uct_ac_za@1.0.0/metadata/dc/description
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