Data · collection · 2011
Molecular comparison of bacterial diversity in uncontaminated and hydrocarbon contaminated marine sediment
Listed in NASA Earthdata CMR
Sediment samples which were originally collected as part of ASAC 868 (ASAC_868) are now being investigated using molecular microbial techniques as part of ASAC 1228 (ASAC_1228).
Description
Samples were collected in a nested survey design in two hydrocarbon impacted areas and two unimpacted areas. Denaturing gradient gel electrophoresis (DGGE) of a region of the 16S RNA gene was used to investigate the microbial community structure.
Banding patterns obtained from the DGGE were transformed into a presence / absence matrix and analysed with a multivariate statistical approach. The download file contains an excel spreadsheet, a csv version of the data, plus a readme file.
Links
Get the data
- Download point for the data. data.aad.gov.au/eds/2970/download ↗
download · from NASA CMR
Where it is published
- DOI doi.org/10.26179/5c776b13016c4 ↗
DOI / persistent id · from NASA CMR
Documentation and papers
- data.aad.gov.au /aadc/metadata/citation.cfm?entry_id=Nested_DGGE ↗
Citation reference for this metadata record and dataset
documentation · from NASA CMR
- Public information for ASAC project 1228 secure3.aad.gov.au/proms/public/projects/report_project_public.cfm?project_no=1228 ↗
project · from NASA CMR
Catalogue records · 2
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C1214313662-AU_AADC.umm_json ↗
metadata API · from NASA CMR
- CMR record cmr.earthdata.nasa.gov/search/concepts/C1214313662-AU_AADC.html ↗
catalogue entry · from NASA CMR
Topics
- Stated by source
- Bacteria/Archaea · Community Structure · Contaminant Levels/Spills · FIELD SURVEYS · Oil Spills · SEDIMENT CORERS
- Inferred from text
- Pollution and contamination 72%
Provenance · 1 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C1214313662-AU_AADC | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[field].anzsrc:group:4105 | enrichment · NASA CMR | taxonomy-embedding@1.1.0 | title+keywords+description (72%) |
| concepts[instrument].gcmd_instrument:sediment-corers | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biological-classification/bacteria-archaea | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/biosphere/ecological-dynamics/community-dynamics/community-structure | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/human-dimensions/environmental-impacts/contaminant-levels-spills | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[measured_variable].gcmd:earth-science/human-dimensions/environmental-impacts/oil-spills | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[platform].gcmd_platform:field-surveys | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| license_text | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| publication_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| spatial | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/SpatialExtent |
| temporal | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/TemporalExtents |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |