Data · dataset · 2026
Toxic cyanobacteria database (TcDB)
Listed in ScienceDB
TcDB is a specialized database dedicated to toxin-producing cyanobacteria.
Description
Relevant information on both toxic and non-toxic cyanobacteria (at the genus, species, and strain levels) was systematically collected from the Web of Science database. The compiled data were organized into two separate files: TcDB_Toxic.xlsx and TcDB_nonToxic.xlsx.The TcDB_Toxic.xlsx table contains information on 475 toxic strains, including the following fields: availability of the 16S rRNA gene for download from NCBI, genus, species, strain, toxin-encoding gene, toxin type, toxin name, toxin abbreviation, detailed toxin characteristics, and corresponding references.The TcDB_nonToxic.xlsx table comprises 225 non-toxic strains, with data categorized into five columns: availability of the 16S rRNA gene from NCBI, genus, species, strain designation, and references.Subsequently, each identified strain was individually queried on the NCBI database, and all accessible full-length 16S rRNA gene sequences were retrieved.
These sequences were further assembled into three FASTA‑format datasets, designated as TcDB_Toxic_strain.fasta, TcDB_Toxic_species.fasta, and TcDB_nonToxic_strain.fasta.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.34984 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.34984 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license_text | source · scidb cn | connector:scidb_cn@1.0.0 | |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |