Data · collection · 2015
Using a monotonic density ratio model to find the asymptotically optimal combination of multiple diagnostic tests
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With the advent of new technology, new biomarker studies have become essential in cancer research.
Description
To achieve optimal sensitivity and specificity, one needs to combine different diagnostic tests. The celebrated Neyman–Pearson lemma enables us to use the density ratio to optimally combine different diagnostic tests.
In this paper, we propose a semiparametric model by directly modeling the density ratio between the diseased and nondiseased population as an unspecified monotonic nondecreasing function of a linear or nonlinear combination of multiple diagnostic tests. This method is appealing in that it is not necessary to assume separate models for the diseased and nondiseased populations. Further, the proposed method provides an asymptotically optimal way to combine multiple test results.
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We use a pool-adjacent-violation-algorithm to find the semiparametric maximum likelihood estimate of the receiver operating characteristic (ROC) curve. Using modern empirical process theory we show cubic root n consistency for the ROC curve and the underlying Euclidean parameter estimation. Extensive simulations show that the proposed method outperforms its competitors.
We apply the method to two real-data applications.
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Where it is published
- Repository landing page tandf.figshare.com/collections/Using_a_monotonic_density_ratio_model_to_find_the_… ↗
landing page · from DataCite
- Repository landing page tandf.figshare.com/collections/Using_a_monotonic_density_ratio_model_to_find_the_… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.c.2090585 ↗
DOI / persistent id · from DataCite
- DOI doi.org/10.6084/m9.figshare.c.2090585.v1 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 4
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- DataCite API api.datacite.org/dois/10.6084/m9.figshare.c.2090585 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.c.2090585.v1 ↗
catalogue entry · from DataCite
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catalogue entry · from DataCite
Topics
- Stated by source
- Mathematics · Mathematics
- From keywords
- Life Sciences · Life Sciences · Mathematics & Statistics · Mathematics & Statistics · Medicine & Health · Medicine & Health · Research, science and technology policy
- Inferred from text
- Cancer 75%
Provenance · 2 source records, 16 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.c.2090585 | 14 d ago | JSON v1 |
| DataCite | 10.6084/m9.figshare.c.2090585.v1 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| concepts[disease].local:disease:cancer | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].fos:mathematics | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:mathematics | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| concepts[field].local:field:life-sciences | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Biological Sciences'] |
| concepts[field].local:field:mathematics-statistics | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Mathematics'] |
| concepts[field].local:field:mathematics-statistics | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Mathematics'] |
| concepts[field].local:field:medicine-health | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Medicine'] |
| concepts[field].local:field:medicine-health | mapping · DataCite | vocabulary-mapper@1.0.0 | keywords['Medicine'] |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
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| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |