Data · dataset · 2015
ALLENMINER data files
Listed in Zenodo
Description
This dataset accompanies the ALLENMINER software package ( fredpdavis.com/allenminer ) that searches gene expression in the adult and developing mouse brain and spinal cord atlases published by the Allen Institute for Brain Science.
- fastsearch files are used to accelerate searches within named brain regions
- allenminer_manuscript_data.tar.gz contains the results of the searches described in the original publication (Davis and Eddy, 2009).
Links
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- allenminer_manuscript_data.tar.gz zenodo.org/api/records/29427/files/allenminer_manuscript_data.tar.gz/cont… ↗
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- v2.01_fastsearch_E13.5.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_E13.5.txt.gz/content ↗
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- v2.01_fastsearch_E18.5.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_E18.5.txt.gz/content ↗
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- v2.01_fastsearch_P28.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_P28.txt.gz/content ↗
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- v2.01_fastsearch_P14.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_P14.txt.gz/content ↗
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- v2.01_fastsearch_P56.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_P56.txt.gz/content ↗
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- v2.01_fastsearch_P4.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_P4.txt.gz/content ↗
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- v2.01_fastsearch_E15.5.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_E15.5.txt.gz/content ↗
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- v2.01_fastsearch_E11.5.txt.gz zenodo.org/api/records/29427/files/v2.01_fastsearch_E11.5.txt.gz/content ↗
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Where it is published
- Zenodo record zenodo.org/records/29427 ↗
landing page · from Zenodo
- DOI doi.org/10.5281/zenodo.29427 ↗
DOI / persistent id · from Zenodo
Documentation and papers
- IsSupplementTo 10.1093/bioinformatics/btp288 doi.org/10.1093/bioinformatics/btp288 ↗
publication · from Zenodo
Catalogue records · 1
- Zenodo API zenodo.org/api/records/29427 ↗
metadata API · from Zenodo
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Zenodo | 29427 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · Zenodo | connector:zenodo@1.0.0 | /metadata/access_right |
| byte_size | source · Zenodo | connector:zenodo@1.0.0 | |
| created_date | source · Zenodo | connector:zenodo@1.0.0 | |
| description | source · Zenodo | connector:zenodo@1.0.0 | /metadata/description |
| license_text | source · Zenodo | connector:zenodo@1.0.0 | |
| publication_date | source · Zenodo | connector:zenodo@1.0.0 | |
| title | source · Zenodo | connector:zenodo@1.0.0 | /metadata/title |
| updated_date | source · Zenodo | connector:zenodo@1.0.0 |