Data · dataset · 2026
Computational and biophysical validation of tobramycin targeting <i>Mycobacterium</i> MetE(Rv1133c): implications for anti-tuberculosis activity & rifampicin synergy
Listed in ZivaHub and Deakin Research Online and DMU Figshare — shown once because both records carry DOI 10.6084/m9.figshare.34036855.v1
<p>The global escalation of multidrug-resistant tuberculosis (MDR-TB) demands identification of novel therapeutic targets.
Description
Here, we establish Vitamin B12-independent methionine synthase E ‘MetE’ (Rv1133c) as a crucial drug target and validate tobramycin as its inhibitor. Through a multi-faceted approach, including virtual screening and MD simulations, we identified interactions between the tobramycin-MetE complex, which were experimentally validated.
Through Isothermal calorimetry we found tobramycin binds to MetE with high affinity (K<sub>a</sub>⁓10<sup>−8</sup>M). Subsequent biophysical characterization revealed an interesting mechanism of action: tobramycin binding induces conformational perturbations of the MetE enzyme, as confirmed by changes in intrinsic fluorescence, denaturation patterns and circular dichroism. Under <i>In-vitro</i> conditions tobramycin demonstrated potent anti-mycobacterial activity at concentrations nontoxic to human macrophage cells.
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We hypothesize that this inhibition involves classical 30S ribosomal binding and MetE disruption. Most significantly, we discovered a powerful synergistic effect between tobramycin and the first-line anti-TB drug, rifampicin. Together, these findings establish a robust preclinical foundation for repurposing tobramycin against management of tuberculosis.</p> <p>Flowchart illustrating tuberculosis treatment strategies, including DOTS, drug repurposing, and virtual screening.The image is a flowchart summarizing tuberculosis (TB) treatment strategies.
At the top, "infected lungs" and an inset depicting active TB in alveolar macrophages highlight the infection. Below, treatment paths show "DOTS Treatment" with limits for multidrug-resistant (MDR) and extensively drug-resistant TB (XDR-TB) crossed out, while "Drug Repurposing" indicates potential benefits for these strains. Arrows lead to an "FDA approved drug library" connected to "Virtual Screening" that produces "Tobramycin" and progresses to "Biophysical Characterization of MetE-Tobramycin".
Results include "Synergy with Rifampicin" and "In-vitro anti-mycobacterial activity".</p> <p></p><p>For the first time we are establishing MetE as a drug target in <i>M.tb</i> which is absent in humans, making it crucial.</p><p>As a part of drug repurposing, for the first time we are validating tobramycin as the first-known inhibitor of MetE.</p><p>We propose that tobramycin’s anti-mycobacterial efficacy is driven by a combination of its classical role in inhibiting protein synthesis and disruption of MetE-mediated methionine biosynthesis.</p><p>We demonstrated synergistic interaction between tobramycin and rifampicin.
This combinatory therapy drastically reduces the required concentrations of both drugs, offering a novel anti-TB strategy with the potential to lower costs, shorten treatment, and combat MDR-TB.</p><p></p> <p>For the first time we are establishing MetE as a drug target in <i>M.tb</i> which is absent in humans, making it crucial.</p> <p>As a part of drug repurposing, for the first time we are validating tobramycin as the first-known inhibitor of MetE.</p> <p>We propose that tobramycin’s anti-mycobacterial efficacy is driven by a combination of its classical role in inhibiting protein synthesis and disruption of MetE-mediated methionine biosynthesis.</p> <p>We demonstrated synergistic interaction between tobramycin and rifampicin.
This combinatory therapy drastically reduces the required concentrations of both drugs, offering a novel anti-TB strategy with the potential to lower costs, shorten treatment, and combat MDR-TB.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.34036855.v1 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Cancer · Cancer · Cancer · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Infectious diseases · Infectious diseases · Infectious diseases · Life Sciences · Life Sciences · Life Sciences · Medicine & Health · Medicine & Health · Medicine & Health · Virology · Virology · Virology
- Inferred from text
- Image 75%
Provenance · 3 source records, 24 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/34036855 | 12 d ago | JSON v1 |
| Deakin Research Online | oai:figshare.com:article/34036855 | 12 d ago | JSON v1 |
| DMU Figshare | oai:figshare.com:article/34036855 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[disease].local:disease:cancer | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[disease].local:disease:cancer | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:field:310706 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310706 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:310706 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Virology'] |
| concepts[field].anzsrc:field:320211 | mapping · figshare dmu ac uk | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:field:320211 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].anzsrc:field:320211 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Infectious Diseases'] |
| concepts[field].local:field:earth-environmental | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare dmu ac uk | connector:figshare_dmu_ac_uk@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · zivahub uct ac za | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |