Table · dataset · 2026
<b>Supplementary Datasets</b>
Listed in HKU DataHub and figshare and Loughborough Research Repository — shown once because both records carry DOI 10.6084/m9.figshare.31035040.v2
<p dir="ltr">Supplementary Data 1.
Description
The temperature, pH, and geochemistry data associated with each of the samples analyzed for this study.</p><p><br></p><p dir="ltr">Supplementary Data 2. Genomic characteristics and taxonomic classification of 2,185 representative metagenome-assembled genomes (rMAGs).</p><p><br></p><p dir="ltr">Supplementary Data 3.
Genomic characteristics and taxonomic classification of 10,603 representative viral operational taxonomic units (vOTUs).</p><p><br></p><p dir="ltr">Supplementary Data 4. Relative abundance of 2,185 rMAGs across 51 seamount samples.</p><p><br></p><p dir="ltr">Supplementary Data 5. TPM values of 10,603 vOTUs across 51 seamount samples.</p><p><br></p><p dir="ltr">Supplementary Data 6.
Read the rest (9 more)
Distribution of KO functional genes across 2,185 rMAGs annotated using DRAM.</p><p><br></p><p dir="ltr">Supplementary Data 7. KEGG modules and functional genes across 28 phyla annotated using METABOLIC.</p><p><br></p><p dir="ltr">Supplementary Data 8. Transcript abundance of genes related to prokaryotic carbon, nitrogen, and sulfur metabolism at the ZB seamount.</p><p><br></p><p dir="ltr">Supplementary Data 9.
Transcript abundance of genes related to prokaryotic organosulfur metabolism and their corresponding taxonomic information.</p><p><br></p><p dir="ltr">Supplementary Data 10. Transcript abundance (TPM) of organosulfur metabolism-related genes across the top 35 microbial genera.</p><p dir="ltr">Supplementary Data 11. Identifiers and taxonomic classification of DddL homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 12.
Identifiers and taxonomic classification of DmdA homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 13. Identifiers and taxonomic classification of TauD homologous protein sequences.</p><p><br></p><p dir="ltr">Supplementary Data 14. GC-FPD peak characteristics of DMS produced by recombinant DddL candidates in two independent experiments.</p><p><br></p><p dir="ltr">Supplementary Data 15.
HPLC peak characteristics of 5-MTHF produced by recombinant DmdA candidates in two independent experiments.</p><p><br></p><p dir="ltr">Supplementary Data 16. OD415-based quantification of taurine-dependent sulfite production by recombinant TauD candidates.</p><p><br></p><p dir="ltr">Supplementary Data 17. Transcript abundance of prokaryotic genes and their corresponding taxonomic information.</p><p><br></p><p dir="ltr">Supplementary Data 18.
Fisher’s LSD grouping letters for level-2 and level-3 KEGG functional categories in Alphaproteobacteria and Gammaproteobacteria across four operational niche-width groups.</p><p><br></p><p dir="ltr">Supplementary Data 19. Competitive mapping-derived relative genomic representation of vOTUs and rMAGs across 51 seamount metagenomes.</p><p><br></p><p dir="ltr">Supplementary Data 20. Count- and TPM-weighted summaries of computationally predicted viral lifestyles across seamounts and depth zones.</p><p><br></p><p dir="ltr">Supplementary Data 21.
Virus-host linkages predicted using iPHoP.</p><p><br></p><p dir="ltr">Supplementary Data 22. Viral auxiliary metabolic genes (AMGs) and their transcript abundance in the ZB seamount metatranscriptomes.</p><p><br></p><p dir="ltr">Supplementary Data 23. Host and taxonomic information for viruses encoding TauD.</p><p><br></p><p dir="ltr">Supplementary Data 24.
Summary of predicted active-site motifs in viral TauD homologues.</p><p><br></p><p dir="ltr">Supplementary Data 25. Definitions and non-overlapping category assignments of the 306 shared target KOs used for the seamount-Tara Oceans comparison.</p><p><br></p><p dir="ltr">Supplementary Data 26. Analysis-unit metadata and pathway-level TPM sums and proportions used for the formal seamount-Tara Oceans metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 27.
Overall and depth-resolved summaries of the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 28. Statistical tests for the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 29. Sample availability and denominator audit for the seamount-Tara Oceans DNA and RNA metabolic comparison.</p><p><br></p><p dir="ltr">Supplementary Data 30.
Abundances of core functional genes across 51 seamount samples.</p><p dir="ltr">Supplementary Data 31. Top three prokaryotic contributors to the transcript abundance of each core metabolic pathway across sampling sites.</p><p><br></p><p dir="ltr">Supplementary Data 32. Joint RPKM-normalized relative transcriptional composition of prokaryotic phyla and viral classes across ZB seamount metatranscriptomes.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.31035040.v2 ↗
DOI / persistent id · from datahub hku hk
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from datahub hku hk
Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Chemistry · Computer Science & AI · Computer Science & AI · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Economics & Finance · Economics & Finance · Engineering · Engineering · Humanities · Humanities · Life Sciences · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Medicine & Health · Medicine & Health · Microbial ecology · Microbial ecology · Microbial ecology · Ocean & Atmospheric Science · Psychology & Behavioral Science · Social Science · Social Science
Provenance · 3 source records, 33 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| HKU DataHub | oai:figshare.com:article/31035040 | 12 d ago | JSON v1 |
| figshare | oai:figshare.com:article/31035040 | 11 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/31035040 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].anzsrc:field:310703 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Microbial ecology'] |
| concepts[field].anzsrc:field:310703 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Microbial ecology'] |
| concepts[field].anzsrc:field:310703 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Microbial ecology'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| description | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/description |
| license | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/rights |
| publication_date | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| title | source · datahub hku hk | connector:datahub_hku_hk@1.0.0 | /metadata/dc/title |