Data · dataset · 2025
Electrochemically controlled switching of dyes for enhanced super-resolution optical fluctuation imaging (EC-SOFI)
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In super-resolution optical fluctuation imaging (SOFI), molecules spaced closer than the diffraction limit can be identified through spatial and temporal correlation analysis of the fluorescence intensity fluctuations.
Description
The resolution and speed of SOFI imaging greatly depend on the characteristics of these fluorescence fluctuations. Fluorophores with stochastic and rapid fluorescence fluctuations are favourable for improving SOFI imaging resolution and speed, especially in high order cumulant analysis.
Stochastic blinking dyes in specific buffers are well-suited for SOFI due to their high brightness and strong fluorescence fluctuations. However, their overall blinking rate can sometimes be too slow, presenting practical limitations for high-resolution and fast SOFI imaging. Furthermore, dye blinking can be non-uniform, creating nonlinearity in SOFI image.
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To address these challenges, we introduce electrochemically controlled dye switching for SOFI (EC-SOFI). By applying an oscillating electrochemical potential to a transparent electrode surface, we increase the overall dye switching rate and uniformity. Using Alexa 647 dye as an example, EC-SOFI reduces the average ON time by over 3-fold and switching variance by more than 2-fold compared to conventional photochemical switching, achieving ~60 nm spatial resolution in 6th order EC-SOFI image.
We further demonstrate that EC-SOFI achieves ~130 nm and ~80 nm resolution with 100 and 300 frames, respectively, enabling fast, large-area tile-scan super-resolution imaging. This advancement in EC-SOFI significantly enhances the practical potential of SOFI technique.
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Where it is published
- Repository landing page datadryad.org/dataset/doi:10.5061/dryad.z34tmpgq9 ↗
landing page · from DataCite
- DOI doi.org/10.5061/dryad.z34tmpgq9 ↗
DOI / persistent id · from DataCite
Documentation and papers
- Creative Commons Zero v1.0 Universal creativecommons.org/publicdomain/zero/1.0/legalcode ↗
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- IsCitedBy 10.1073/pnas.2425390122 doi.org/10.1073/pnas.2425390122 ↗
publication · from DataCite
- IsCitedBy 10.1101/2024.06.02.597055 doi.org/10.1101/2024.06.02.597055 ↗
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Catalogue records · 2
- DataCite API api.datacite.org/dois/10.5061/dryad.z34tmpgq9 ↗
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- DataCite Commons commons.datacite.org/doi.org/10.5061/dryad.z34tmpgq9 ↗
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Topics
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.5061/dryad.z34tmpgq9 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:imaging | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (75%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| version_label | source · DataCite | connector:datacite@1.0.0 |