Data · dataset
[Diopatra SNPs (SRA)] - Decorator worm Diopatra cuprea single nucleotide polymorphism (SNP) genotypes from collections in the Gulf of Mexico and eastern United States estuaries from 2009 to 2022 (The genetic legacy of an Asian oyster introduction and its disease-causing parasite)
Listed in Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAP
The decorator worm Diopatra cuprea Bosc, 1802 (Annelid; Polychaete; Onuphidae) is an ecosystem engineer within high-salinity estuaries of the southern and eastern United States.
Description
A previous study revealed five morphologically cryptic mitochondrial lineages across its broad geographic distribution. We genotyped single-nucleotide polymorphisms (SNPs) with RADseq.
This dataset includes metadata, methods, links to published code and processed data used to generate figures for the results publication Ziegler et al. (2025,doi:10.1007/s00227-025-04613-8) titled "Multiple cryptic lineages and restricted gene flow in the decorator worm Diopatra cuprea." This dataset also includes genetic accession identifiers for sequence data contributed to the National Center for Biotechnology Information (NCBI)'s Sequence Read Archive (SRA), available under BioProject PRJNA1103840.
Links
Where it is published
- ERDDAP dataset info erddap.bco-dmo.org/erddap/info/bcodmo_dataset_998297_v1/index.html ↗
landing page · from erddap bco dmo org
Documentation and papers
- Dataset documentation osprey.bco-dmo.org/dataset/998297 ↗
documentation · from erddap bco dmo org
Catalogue records · 1
- ERDDAP tabledap access form erddap.bco-dmo.org/erddap/tabledap/bcodmo_dataset_998297_v1.html ↗
metadata API · from erddap bco dmo org
Topics
- From keywords
- Ocean & Atmospheric Science
Provenance · 1 source records, 5 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Biological and Chemical Oceanography Data Management Office (BCO-DMO) ERDDAP | bcodmo_dataset_998297_v1 | 15 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | |
| description | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | /summary |
| spatial | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | |
| title | source · erddap bco dmo org | connector:erddap_bco_dmo_org@1.0.0 | /title |