Data · collection · 2021
Alnus glutinosa (L.) Gaertn. and Orientus ishidae (Matsumura, 1902) share phytoplasma genotypes linked to the “Flavescence dorée” epidemics
Listed in NASA Earthdata CMR
Flavescence dorée (FD) is a grapevine disease caused by associated phytoplasmas (FDp), which are epidemically spread by their main vector Scaphoideus titanus.
Description
The possible roles of alternative and secondary FDp plant hosts and vectors have gained interest to better understand the FDp ecology and epidemiology. A survey conducted in the surroundings of a vineyard in the Swiss Southern Alps aimed at studying the possible epidemiological role of the FDp secondary vector Orientus ishidae and the FDp host plant Alnus glutinosa is reported.
Data used for the publication. Insects were captured by using a sweeping net (on common alder trees) and yellow sticky traps (Rebell Giallo, Andermatt Biocontrol AG, Switzerland) placed in the vineyard canopy. Insects were later determined and selected for molecular analyses.
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Grapevines and common alder samples were collected using the standard techniques. The molecular analyses were conducted in order to identify samples infected by the Flavescence dorée phytoplasma (16SrV-p) and the Bois Noir phytoplasma (16SrXII-p). A selection of the infected sampled were further characterized by map genotype and sequenced in order to compare the genotypes in insects, grapevines and common alder trees.
Links
Where it is published
- DOI doi.org/10.16904/envidat.221 ↗
DOI / persistent id · from NASA CMR
Documentation and papers
- VIEW RELATED INFORMATION envidat.ch/dataset/alnus-glutinosa-orientus-ishidae-flavescence-doree ↗
documentation · from NASA CMR
- GET RELATED VISUALIZATION envidat.ch/envidat_thumbnail.png ↗
preview image · from NASA CMR
Catalogue records · 2
- CMR UMM-JSON cmr.earthdata.nasa.gov/search/concepts/C2789814963-ENVIDAT.umm_json ↗
metadata API · from NASA CMR
- CMR record cmr.earthdata.nasa.gov/search/concepts/C2789814963-ENVIDAT.html ↗
catalogue entry · from NASA CMR
Topics
- Stated by source
- Land Surface Agriculture Indicators · Not provided
- Inferred from text
- Disease 75%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NASA Earthdata CMR | C2789814963-ENVIDAT | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NASA CMR | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[measured_variable].gcmd:earth-science/climate-indicators/land-surface-agriculture-indicators | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| concepts[platform].gcmd_platform:not-provided | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| created_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| description | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/Abstract |
| license_text | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| publication_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| spatial | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/SpatialExtent |
| title | source · NASA CMR | connector:nasa_cmr@1.0.0 | /umm/EntryTitle |
| updated_date | source · NASA CMR | connector:nasa_cmr@1.0.0 | |
| version_label | source · NASA CMR | connector:nasa_cmr@1.0.0 |