Raw Data files for; Comparative Analysis of Blood-Associated Bacterial Communities Among selected Migratory Birds species in Pakistan using 16S rRNA Sequencing

<p dir="ltr">This repository contains the raw data and analysis outputs supporting the study titled "Comparative Analysis of Blood-Associated Bacterial Communities among Selected Migratory Bird Species in Pakistan Using 16S rRNA Sequencing".</p><p dir="ltr">File Descriptions:</p><ol><li>ASVs_rep.fasta: Amplicon Sequence Variants representative sequences file containing the bacterial 16S rRNA sequences.</li><li>DistanceMatrix.xlsx: Beta diversity distance matrices used for community structure comparisons.</li><li>Diversity_Index.xlsx: Alpha and beta diversity index calculations for the avian blood samples.</li><li>PCoA_Bray_curtis_PC.xlsx / PCoA_Unweighted_Unifrac_PC.xlsx / PCoA_Weighted_Unifrac_PC.xlsx: Principal Coordinates Analysis coordinate data based on Bray-Curtis, unweighted UniFrac, and weighted UniFrac dissimilarities.</li><li>QC_statistics.xlsx: Quality control and sequencing statistics for the raw reads and filtering steps.</li><li>Taxonomy_abundance_count.xlsx / Taxonomy_abundance_percentage.xlsx: Taxonomic abundance profiles in counts and percentages across samples.</li><li>TAXONOMY_Assignment.xlsx: Taxonomic classification results for the identified bacterial ASVs.</li><li>Taxonomy_Top20_input.xlsx: Summary data highlighting the top 20 most abundant bacterial taxa.</li></ol><p></p>