Data · dataset · 2026
Priloga S1
Listed in NCL Data
<table><tr><td><p dir="ltr">SLO: Datoteka vsebuje filtrirane genetske različice vključene družine Wye Target x BL2/1 in testnih genotipov v zapisu VCF, ki smo jih pripravili z uporabo orodja TASSEL 5 v okviru doktorske naloge.
Description
Variante smo filtrirali glede na naslednja merila: največji dopusten delež manjkajočih podatkov na mestu SNP smo določili pri 35,5 %, prag frekvence redkega alela (MAF) pri 0,05, najmanjšo porazdelitev heterozigotnosti pri 0,1 ter največjo porazdelitev heterozigotnosti pri 0,9.</p><p dir="ltr"> EN: The file contains filtered genetic variants of the Wye Target x BL2/1 family and the test genotypes in VCF format, prepared using TASSEL 5 as part of the doctoral thesis.
The variants were filtered according to the following criteria: a maximum allowable proportion of missing data per SNP site of 35.5%, a minor allele frequency (MAF) threshold of 0.05, a minimum heterozygosity distribution of 0.1, and a maximum heterozygosity distribution of 0.9.</p></td></tr></table><p></p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.34069086.v2 ↗
DOI / persistent id · from data ncl ac uk
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from data ncl ac uk
Topics
- From keywords
- Earth & Environmental Science · Sequence analysis
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCL Data | oai:figshare.com:article/34069086 | 20 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[field].anzsrc:field:310206 | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['Sequence analysis'] |
| concepts[field].local:field:earth-environmental | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · data ncl ac uk | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| title | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/title |