Data · dataset · 2021
Dataset for study "Recording site placement on planar silicon-based probes affects signal quality in acute neuronal recordings"
Listed in ARP Research Data Repository
Here we provide the dataset for our study "Recording site placement on planar silicon-based probes affects signal quality in acute neuronal recordings".
Description
Abstract of the study: Multisite, silicon-based probes are widely used tools to record the electrical activity of neuronal populations. Several physical features of these devices are designed to improve their recording performance.
Here, our goal was to investigate whether the position of recording sites on the silicon shank might affect the quality of the recorded neural signal in acute experiments. Neural recordings obtained with five different types of high-density, single-shank, planar silicon probes from anesthetized rats were analyzed. Wideband data were filtered to extract spiking activity, then the amplitude distribution of samples and quantitative properties of the recorded brain activity (single unit yield, spike amplitude and isolation distance) were compared between sites located at different positions of the silicon shank, focusing particularly on edge and center sites.
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Edge sites outperformed center sites: for all five probe types there was a significant difference in the signal power computed from the amplitude distributions, and edge sites recorded significantly more large amplitude samples both in the positive and negative range. Although the single unit yield was similar between site positions, the difference in spike amplitudes was noticeable in the range corresponding to high-amplitude spikes.
Furthermore, the advantage of edge sites slightly decreased with decreasing shank width. Our results might aid the design of novel neural implants in enhancing their recording performance by identifying more efficient recording site placements.
Links
Where it is published
- Dataverse dataset page repo.researchdata.hu/dataset.xhtml?persistentId=hdl%3A21.15109%2FCONCORDA%2FQNWBW4 ↗
landing page · from repo researchdata hu
- Persistent identifier hdl.handle.net/21.15109/CONCORDA/QNWBW4 ↗
DOI / persistent id · from repo researchdata hu
Catalogue records · 1
- Dataverse API repo.researchdata.hu/api/datasets/:persistentId/?persistentId=hdl%3A21.15109%2FCONC… ↗
metadata API · from repo researchdata hu
Topics
- Stated by source
- Engineering · Medicine, Health and Life Sciences
- From keywords
- Engineering · Life Sciences · Medicine & Health
- Inferred from text
- Biomedical engineering 69%
Provenance · 1 source records, 12 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ARP Research Data Repository | hdl:21.15109/CONCORDA/QNWBW4 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].anzsrc:group:4003 | enrichment · repo researchdata hu | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].dataverse_subject:engineering | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /subjects |
| concepts[field].dataverse_subject:medicine-health-and-life-sciences | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /subjects |
| concepts[field].local:field:engineering | mapping · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /subjects |
| concepts[field].local:field:life-sciences | mapping · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /subjects |
| concepts[field].local:field:medicine-health | mapping · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /subjects |
| created_date | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | |
| description | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /description |
| publication_date | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | |
| title | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | /name |
| updated_date | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 | |
| version_label | source · repo researchdata hu | connector:repo_researchdata_hu@1.0.0 |