Imaging · dataset · 2017
Single-Cell Intensity Values Obtained From Microscopy for "An allosteric theory of transcription factor induction"
Listed in CaltechDATA
These data correspond to the single-cell mean intensity values obtained from microscopy images used to quantify fluorescence and compute the fold-change in gene expression due to the activity of the Lac repressor molecule in E. coli cells.
Description
These data were used to calculate the population mean fluorescence value. This information was then used to compute the fold-change in gene expression.
These data are separated by the operator we examined. Eight different strains were measured for each dataset. Please see the main text or the paper website at rpgroup-pboc.github.io/mwc_induction for more information.
Links
Where it is published
- CaltechDATA record data.caltech.edu/records/0964t-ttr03 ↗
landing page · from data caltech edu
- DOI doi.org/10.22002/d1.227 ↗
DOI / persistent id · from data caltech edu
Catalogue records · 1
- InvenioRDM API data.caltech.edu/api/records/0964t-ttr03 ↗
metadata API · from data caltech edu
Topics
- Stated by source
- Biophysics · microscopy · physical biology · Single Cell · Transcriptional Regulation
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Microscopy · Social Science
- Inferred from text
- Image 65% · Structural biology 76% · Text 75%
Provenance · 1 source records, 20 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| CaltechDATA | 0964t-ttr03 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].anzsrc:field:310112 | enrichment · data caltech edu | taxonomy-embedding@1.0.0 | title+keywords+description (76%) |
| concepts[field].local:field:earth-environmental | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:engineering | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:humanities | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:social-science | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:microscopy | mapping · data caltech edu | vocabulary-mapper@1.0.0 | keywords['microscopy'] |
| concepts[modality].local:modality:text | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[topic].invenio_subject:data_caltech_edu:biophysics | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:microscopy | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:physical-biology | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:single-cell | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:transcriptional-regulation | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| description | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/description |
| publication_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| title | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/title |
| updated_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| version_label | source · data caltech edu | connector:data_caltech_edu@1.0.0 |