Data · dataset · 2020
The First Complete Mitochondrial Genome Data of Hippocampus kuda Originating from Malaysia
Listed in Teesside University Research Data Repository
Mitogenome sequences assembled using raw data for two Malaysian Hippocampus kuda (HK1 and HK2).
Description
Genomic DNA was extracted using Qiagen Blood and Tissue Kit (Qiagen, Valencia, CA) following the manufacturer’s instructions. All libraries were prepared using BEST protocol as described in Mak et al., (2017) and were sequenced on an BGISEQ-500 platform (100PE).
Raw sequence reads were assembled into individual mitogenome sequence using the MITOBIM v1.8 (reference genome assembly) pipelines. Mitogenome mapping quality was assessed using PALEOMIX and further annotated using MitoAnnotator and GB2sequin annotation web application. The mitogenome data is available in Genbank with the accession numbers MT221436 and MT221436.
Links
Where it is published
- DOI doi.org/10.17632/b3yjvcn7k2.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Social Science
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/b3yjvcn7k2.1 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |