Excel · study · 2026
Genome-wide identification of Flo8-binding regions by ChIP-seq.
Listed in NCBI GEO
Flo8 is a transcription factor involved in the regulation of multiple cellular processes in Candida glabrata.
Description
To characterize its genome-wide DNA-binding profile, chromatin immunoprecipitation followed by sequencing (ChIP-seq) was performed using a strain expressing 3×HA-tagged Flo8, with an untagged Flo8 strain serving as the negative control. Sequencing reads were aligned to the C. glabrata reference genome, and Flo8-enriched regions were identified by comparison with the corresponding input and control samples.
The resulting dataset provides a genome-wide map of Flo8-binding sites and facilitates the identification of potential target genes and regulatory pathways associated with metabolism, stress adaptation, and iron homeostasis.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE341nnn/GSE341121 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE341121 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1499613 ncbi.nlm.nih.gov/bioproject/PRJNA1499613 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Sequencing 75%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE341121 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |