Data · dataset · 2026
Supplementary datasets for " Harnessing endogenous CRISPR-Cas9 for inducible genetic engineering of Apilactobacillus kunkeei "
Listed in Researchdata.se
Dataset_1: Output_PAM_2 Folder contains PAM hits for the 90 strains having Type IIA Crispr-Cas system.
Description
The GTTTTAGAAG hit should not be considered for PAM consensus analysis as it is part of the repeat sequence Dataset_2: Spacer Folder contains Spacers for each of the 90 strains including spacers for Type I E Crispr-Cas system Dataset_3: Images for Weblogo based PAM consensus analysis for the 90 strains having Type IIA Crispr-Cas system Dataset_4 Sanger sequencing fasta results for the gntT gene and rpoB genes from respective A. kunkeei strains Dataset_5 Plasmid sequences of backbone plasmids pVPL3017, pVPL3115 and pSIP411 used for construction of pMER and pMECK Dataset_6 Genome_assembled_reads.
Assembled read data for the edited strains of A. kunkeei.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.30579986 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Life Sciences · Medicine & Health
- Inferred from text
- Image 65% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-30579986/0 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |