Text · study · 2026
Fusarium graminearum grown in vitro and challenged with F. avenaceum filtrate leads to the strong induction of a F. graminearum ABC transporter.
Listed in NCBI GEO
Fusarium cereal pathogens are known to produce a diverse array of mycotoxins and other secondary metabolites which may act together to cause plant disease and adverse effects on human and animal health.
Description
To study the impact of Fusarium interactions, we chose F. graminearum and F. avenaceum, which are known to co-contaminate Canadian durum wheat samples resulting in the deposition of trichothecenes, enniatins, moniliformin, and other bioactive compounds.
We are studying the interaction of a F. graminearum (3-ADON-producer) and a F. avenaceum strain (both isolated from the same wheat sample) in durum wheat spikes. To study the impact of F. avenaceum secondary metabolites on F. graminearum, we conducted transcriptomic profiling of F. graminearum grown in the presence of F. avenaceum culture filtrate extracts in vitro. A F. graminearum ABC transporter gene was strongly induced in vitro upon exposure to F. avenaceum culture filtrate.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE130nnn/GSE130915 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE130915 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA541960 ncbi.nlm.nih.gov/bioproject/PRJNA541960 ↗
project · from NCBI GEO
- PubMed 42506285 pubmed.ncbi.nlm.nih.gov/42506285 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array
- From keywords
- Life Sciences
- Inferred from text
- Disease 75%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE130915 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |