Omics · study · 2026
Far-red perception by vegetative organs and not fruits drives fruit growth responses in tomato plants
Listed in NCBI GEO
Responses to far-red are mediated by phytochromes, specialised photoreceptors present in all organs of a tomato plant.
Description
Although fruit-localised phytochromes can influence starch and sugar metabolism, their involvement in modulating fruit growth responses to far-red is unknown. We explored whether fruit growth responses to far-red are driven by local far-red perception within the fruits, or by a systemic response initiated in the vegetative organs.
We applied far-red exclusively to the fruiting trusses, from anthesis to ripening, to the vegetative organs, to both, or to neither. We quantified plant development and fruit growth responses to far-red and carried out a transcriptomic analysis to establish the temporal dynamics of far-red perception and signalling in leaves and fruits. Supplementing far-red to the vegetative organs led to a significant increase in ripe fruit weight and sugar concentration, regardless of the light conditions experienced by the trusses, whereas far-red supplementation to the generative organs alone had no measurable effect.
Read the rest (2 more)
This study establishes that far-red perception by vegetative organs drives fruit growth responses in tomato. Local responses to far-red included a transient increase in auxin concentration and upregulation of the auxin-signalling pathway in leaves, a conserved response to decreasing R:FR ratios. In fruits, early transcriptomic responses carried signatures of auxin, cytokinin, and gibberellin biosynthesis and signalling, suggesting a role for hormones as mediators of far-red-induced fruit responses.
Finally, this work reveals how responses to far-red perception by vegetative organs promote sink strength and starch biosynthesis in early developing fruits, contributing to higher fruit weight and sugar concentration in ripe fruits.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE320nnn/GSE320482 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE320482 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1428289 ncbi.nlm.nih.gov/bioproject/PRJNA1428289 ↗
project · from NCBI GEO
- PubMed 42289860 pubmed.ncbi.nlm.nih.gov/42289860 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE320482 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |