Appendix D Endophytic fungi from cabbage in New Zealand 2016

Columns contain a recorded value for variables:<br><br>frag_no - arbitrary tissue fragment numbering <br>region - regions in New Zealand where cabbage plants were sampled (Canterbury – h, Nelson – m and Pukekohe – a).<br>plant - arbitrary numbering of plants in given region<br>part - cabbage tissue R- root, S -stem, L - leaf<br>medium - cultivation medium - Potato dextrose agar (p), 1/4 strength potato dextrose agar (1), Sabouraud dextrose agar (s) and Aspergillus minimal medium (a)<br>well - arbitrary numbering of wels on cultivation plate<br>for plant2, part2, medium2 similar to above<br>fragment - code for tissue fragment from which given isolate originated<br>isolate - code for isolate<br>description of morphotypes<br>mycelium_color - colour of mycelium <br>mycelium_color_under - colour of the bottom of cultivation dish<br>mycelium_texture - texture of mycelim <br>sclerotia - whether present or not<br>spores - colour and texture of spores concentric on petri dish (conc), <br>media_coloring - colouring of the cultivation media by growing isolate<br> colours white (w), grey(g), green(gn), brown(b), yellow(yel), black (bl), purple (pu), orange (o), pink (pi), beige (be), dark(dk), light(li), pinch (P)<br> texture - fluffy (fl), growing in agar (ia), yeast-like (yes), chunky (ch) scant (s), compact (comp), flat(ft)<br> other abbreviations - somewhat (sw), in mycelium (im), vis (visible), dry (d), oozing (ooze), fragmente (frg), at the edge of colony (oe)<br><br>sequence - ITS sequence <br>MatchUNITE - match with UNITE database<br>identityUNITE - BLAST identity result for the best match with UNITE database<br>lengthUNITE - BLAST length result for the best match with UNITE database<br>lineageUNITE - taxonomy extracted from the best match with UNITE database<br>speciesUNITE - species extracted from the best match with UNITE database<br>genusUNITE- genus extracted from the best match with UNITE database<br>identityNCBI - BLAST identity result for the best match with NCBI database<br>MatchNCBI - BLAST identity result for the best match with NCBI database<br>speciesNCBI - species extracted from the best match with NCBI database<br>genusNCBI - genus extracted from the best match with NCBI database<br>lengthNCBI - BLAST length result for the best match with NCBI database<br>species - species name <br>genus - genus name <br>identity - BLAST identity result for the best match<br>blastlength - BLAST length result for the best match<br>seqlength - length of sequence<br>family - family name<br>order - order name<br>class - class name<br>phylum - phylum name