Omics · dataset · 2024
Identification and validation of hypoxia responsive signature pathways in human cardiomyocytes
Listed in Teesside University Research Data Repository
Cardiomyocyte proliferation contributes to heart growth and development in humans.
Description
During ischemia, cardiomyocytes are unable to oxidize energetic substrates, which causes a significant depletion in ATP reserves. Heart remodels in response to increased workload by generating additional muscle mass in hypoxic microenvironment leading to impaired basic cardiac functions and hypertrophy.
The exact molecular mechanism of cardiac injury induced by hypoxia is not completely understood. The present study design to investigate the effect of hypoxia (1% O2) for 24 h in human AC16 cells by analyzing alteration in expression of cardiac markers and signature pathways using immunocytochemistry and next generation sequencing respectively. The gene set enrichment analysis and cytoscape software was used for data analysis and visualization respectively.This analysis revealed multiple pathways associated with hypoxia which provide valuable insight into molecular mechanisms underlying human cardiomyocytes, presenting potential targets addressing cardiac illnesses induced by hypoxia.
Links
Where it is published
- DOI doi.org/10.17632/wwgkdkyk3r.1 ↗
DOI / persistent id · from researchdata tees ac uk
Catalogue records · 1
- OAI-PMH record data.mendeley.com/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Adata… ↗
metadata API · from researchdata tees ac uk
Topics
- From keywords
- Earth & Environmental Science · RNA sequencing
- Inferred from text
- Heart 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Teesside University Research Data Repository | oai:data.mendeley.com/wwgkdkyk3r.1 | 14 h ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:earth-environmental | mapping · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| concepts[modality].local:modality:rna-seq | mapping · researchdata tees ac uk | vocabulary-mapper@1.0.0 | keywords['RNA Sequencing'] |
| concepts[modality].local:modality:sequencing | enrichment · researchdata tees ac uk | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | |
| title | source · researchdata tees ac uk | connector:researchdata_tees_ac_uk@1.0.0 | /metadata/dc/title |