Excel · study · 2026
ADAR binding to dsRNA prevents exogenous RNAi from attacking self-produced dsRNA in C. elegans
Listed in NCBI GEO
The ability of an organism to distinguish between self and foreign dsRNA is central to eliciting an immune response when needed while preventing autoimmunity.
Description
Using Caenorhabditis elegans, we investigated the interplay between two host pathways that regulate dsRNA expression and function, A-to-I RNA editing by ADARs, and RNA interference (RNAi). We found that the number of siRNAs targeting edited genes is significantly upregulated in ADAR mutant animals.
In addition, despite an almost complete depletion of primary siRNAs generated from editing sites in wild-type animals, secondary siRNAs are generated from edited transcripts, suggesting that ADARs antagonize only the first step of RNAi processing. We show that ADARs interfere with the efficacy of exogenous RNAi in vivo, likely to prevent trans-silencing, and provide evidence that ADR-2 binding to dsRNA is required for efficient RNAi suppression.
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This work sheds light on how RNA editing safeguards self dsRNAs against immune recognition and by-product degradation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE239nnn/GSE239862 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE239862 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1001294 ncbi.nlm.nih.gov/bioproject/PRJNA1001294 ↗
project · from NCBI GEO
Topics
- Stated by source
- Caenorhabditis elegans · Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE239862 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:6239 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |