Data · dataset · 2014
Pan-genome Pseudomonas aeruginosa Supplementary Table S1
Listed in DataCite
The Pseudomonas aeruginosa 's pan-genome was described by means of comparing and clustering all the predicted proteins of the selected strains (Table 1).
Description
The clustering was done using CD-HIT version 4.6, using a 0.80 identity threshold, with longest-sequence-first list removal algorithm. Core genome was computed by means of Best Bidirectional Blast Hits and then a Genomic Similarity Score was calculated for all the Pseudomonas genus (November, 2013, v2 dataset).
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Pan_genome_Pseudomonas_aeruginosa_Supplementa… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.760583 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.760583 ↗
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- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.760583 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Biological sciences · Computer and information sciences
- Inferred from text
- Tabular 65%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.760583 | 14 d ago | JSON v1 |
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| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:tabular | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
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