Omics · study · 2026
Arabidopsis transcriptomic response to Flavobacterium sp. 98 inoculation
Listed in NCBI GEO
Drought is one of the most detrimental environmental factors that adversely affect crop production, thus jeopardizing food supplies for a growing world population.
Description
Over the past years, it has become evident that microorganisms associated with plants can enhance drought tolerance. However, the specific genetic and molecular mechanisms underpinning bacterial induction of drought tolerance in plants are still largely unknown.
In our work, we have shown that a root endophytic Flavobacterium sp. 98 confers significant drought tolerance to Arabidopsis thaliana without compromising growth and yield. Here, we compared the transcriptome of Arabidopsis seedlings inoculated with Flavobacterium or mock (time series) to identify transcription reprograming induced by Flavo in plants.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE244nnn/GSE244750 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE244750 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1024488 ncbi.nlm.nih.gov/bioproject/PRJNA1024488 ↗
project · from NCBI GEO
- PubMed 42601500 pubmed.ncbi.nlm.nih.gov/42601500 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Arabidopsis thaliana · Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE244750 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:3702 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |