Omics · dataset · 2021
Data related to "The Archegozetes longisetosus genome project"
Listed in CaltechDATA
All data related to the Archegozetes longisetosus genome (excluding sequencing data which are available on NCBI: PRJNA683935 and PRJNA683999).
Description
The data includes all fasta files (transcriptome, genome), gff-files, annotations, RNAseq analysis, GO-terms, KEGG-annotation, repeat masking and supplementary figures.
Links
Where it is published
- CaltechDATA record data.caltech.edu/records/01pg4-5r437 ↗
landing page · from data caltech edu
- DOI doi.org/10.22002/d1.1877 ↗
DOI / persistent id · from data caltech edu
Catalogue records · 1
- InvenioRDM API data.caltech.edu/api/records/01pg4-5r437 ↗
metadata API · from data caltech edu
Topics
- Stated by source
- Acari · chromosome-level assembly · genome sequencing · Hi-C proximity ligation · mites · model species · Sarcoptiformes
- From keywords
- Earth & Environmental Science · Engineering · Genome sequencing · Humanities · Life Sciences · Social Science
- Inferred from text
- Evolutionary biology 71% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 23 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| CaltechDATA | 01pg4-5r437 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].anzsrc:group:3104 | enrichment · data caltech edu | taxonomy-embedding@1.0.0 | title+keywords+description (71%) |
| concepts[field].local:field:earth-environmental | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:engineering | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:humanities | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[field].local:field:social-science | mapping · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[modality].local:modality:genome-sequencing | mapping · data caltech edu | vocabulary-mapper@1.0.0 | keywords['genome sequencing'] |
| concepts[modality].local:modality:rna-seq | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · data caltech edu | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[topic].invenio_subject:data_caltech_edu:acari | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:chromosome-level-assembly | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:genome-sequencing | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:hi-c-proximity-ligation | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:mites | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:model-species | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| concepts[topic].invenio_subject:data_caltech_edu:sarcoptiformes | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| description | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/description |
| license | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| publication_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| title | source · data caltech edu | connector:data_caltech_edu@1.0.0 | /metadata/title |
| updated_date | source · data caltech edu | connector:data_caltech_edu@1.0.0 | |
| version_label | source · data caltech edu | connector:data_caltech_edu@1.0.0 |