Data · dataset · 2026
History of the Arctic Flora in North America
Listed in National Center for Atmospheric Research
This dataset in an attempt to increase understanding of how climate cycles of the Quaternary (the last 2.6 million years) impacted divergence in Arctic and alpine tundra flora.
Description
Specimens were collected in Beringia and the mountains of western North America, focusing on populations existing within (western and eastern Beringia, and the Pacific Northwest and Rocky Mountains, respectively), as well as sites between those refugia.
Briefly, DNA was sequenced from chloroplast and nuclear loci for multiple species of tundra plants that inhabited the entire study region. Target species (Campanula species, Kobresia myosuroides, Lloydia serotina, Pinguicula vulgaris, Poa alpina, Rhodiola species, and Saxifraga species) were phylogenetically diverse and displayed a range of dispersal abilities, making them excellent candidates for evaluating general history of the tundra.
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Those genetic data make up this Arctic Flora dataset. From the genetic sequence data, gene trees are being reconstructed and used to estimate the patterns and timing of divergence, test which geologic and climatic events most impacted divergence, and infer how the process of genetic divergence differed between Arctic and alpine tundra refugia. The data is archived in nexus files - the standard format for aligned sequence data ready to be used in a phylogenetic analysis.
The files are separated by taxon and genetic locus within a given taxon. The nexus format provides details on the data type (DNA), number of samples, and length of sequence. Within a file, all the sequences are aligned but not interleaved, such that the 'sample name' is followed by the entire sequence for that sample.
All the specimens that were collected are archived and publicly accessible in the Western Washington University Herbarium.
Links
Get the data
- Publisher page data.eol.ucar.edu/dataset/106.438 ↗
documentation · download · from data ucar edu
Where it is published
- data.ucar.edu /dataset/history-of-the-arctic-flora-in-north-america ↗
National Center for Atmospheric Research dataset page
landing page · from data ucar edu
Catalogue records · 1
- CKAN API data.ucar.edu/api/3/action/package_show?id=c6b007ca-cef6-4ef9-bbbc-9f928aead… ↗
metadata API · from data ucar edu
Topics
- From keywords
- Earth & Environmental Science · Life Sciences · Ocean & Atmospheric Science
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| National Center for Atmospheric Research | c6b007ca-cef6-4ef9-bbbc-9f928aead0c4 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[field].local:field:earth-environmental | mapping · data ucar edu | connector:data_ucar_edu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data ucar edu | connector:data_ucar_edu@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · data ucar edu | connector:data_ucar_edu@1.0.0 | |
| created_date | source · data ucar edu | connector:data_ucar_edu@1.0.0 | |
| description | source · data ucar edu | connector:data_ucar_edu@1.0.0 | /notes |
| publication_date | source · data ucar edu | connector:data_ucar_edu@1.0.0 | |
| title | source · data ucar edu | connector:data_ucar_edu@1.0.0 | /title |
| updated_date | source · data ucar edu | connector:data_ucar_edu@1.0.0 |