Excel · study · 2026
Preliminary Screening and Application of Quorum Quenching Genes Targeting the Phc System in Ralstonia solanacearum
Listed in NCBI GEO
The signal 3-OH-PAME produced by the phc QS system in Ralstonia solanacearum is a conserved and important quorum sensing signal molecule in this genus.
Description
This signal participates in the activation of signal transduction by the PhcA regulatory factor, regulating the transcriptional control of 30% of the genes in Ralstonia solanacearum. Quorum quenching technology is a biocontrol strategy that mediates quorum sensing regulatory networks, and has achieved very significant results in the study of quenching AHL and DSF signals.
Previous studies identified HS-18 as a biocontrol bacterium with quorum sensing-inhibiting effects on multiple quorum sensing signals. This study aimed to identify quorum quenching enzymes capable of degrading 3-OH PAME using HS-18, identifying six enzymes encoded by genes that exhibit degradation activity toward 3-OH PAME. Among these, gene 12725 demonstrated the most significant quorum quenching effect, while genes 24610 and 03720 also exhibited strong quorum quenching activity.
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Additionally, these quench enzymes can reduce the pathogenicity of Ralstonia solanacearum on tomatoes, demonstrating promising application prospects.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE303nnn/GSE303011 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE303011 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1292180 ncbi.nlm.nih.gov/bioproject/PRJNA1292180 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE303011 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |