Excel · study · 2026
Campylobacter jejuni transcriptional response during growth in media with low and high viscosity
Listed in NCBI GEO
Campylobacter jejuni normally grows in the lower intestinal mucus layer as a commensal in avian and animal hosts or as a pathogen in humans.
Description
Increasing viscosity of media to physiological levels present in lower intestinal mucus has been observed to increase growth and swimming velocity of WT C. jejuni. Two mutants (DflgV) and (DvidC; DCjj81176_1732) that lack components of the C. jejuni flagellar motor were identified that do not properly modulate swimming velocity in a viscosity-dependent manner.
These mutants also have growth and viability defects when grown in standing broth cultures composed of Mueller-Hinton broth at low viscosity (1 cP; no methycellulose) or higher viscosity (40 cP; with methylcellulse). The transcriptome of WT C. jejuni and two mutants lacking FlgV or VidC were analyzed and compared after growth in standing Mueller-Hinton broth cultures of 1 or 40 cP.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE313nnn/GSE313853 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313853 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1381678 ncbi.nlm.nih.gov/bioproject/PRJNA1381678 ↗
project · from NCBI GEO
- PubMed 42263120 pubmed.ncbi.nlm.nih.gov/42263120 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 6 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE313853 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |