Data · dataset · 2015
Sophisticated flavonoid pathway map based on large scale flavonoid profile datasets in Arabidopsis
Listed in DataCite
Description
How to duplicate the process in the article Dependent software - Cytoscape 3.2.1 (cytoscape.org) - R 3.2.0 (r-project.org) Dependent R package - ggplot2 Reproducing Figure 2. 1. Install and run Cytoscape 3.2.1 2. Open figure3.cys with Open Session toolbar button.
Reproducing Figure 4. 1. Install R and ggplot2. 2. Run fig4.R with R. This script generates barplot png images for fig4.csv . 3.
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We manually created a network in fig4.cys . Then we renamed the barplot png images and mapped the images in fig4.cys . Although fig4.cys already has the custom graphics in the network, you can remap it with Cytoscape custom graphics manager.
Links
Where it is published
- Repository landing page figshare.com/articles/dataset/Sophisticated_flavonoid_pathway_map_based_on_… ↗
landing page · from DataCite
- DOI doi.org/10.6084/m9.figshare.1385381 ↗
DOI / persistent id · from DataCite
Documentation and papers
Catalogue records · 2
- DataCite API api.datacite.org/dois/10.6084/m9.figshare.1385381 ↗
metadata API · from DataCite
- DataCite Commons commons.datacite.org/doi.org/10.6084/m9.figshare.1385381 ↗
catalogue entry · from DataCite
Topics
- Stated by source
- Computer and information sciences
- Inferred from text
- Image 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| DataCite | 10.6084/m9.figshare.1385381 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| byte_size | source · DataCite | connector:datacite@1.0.0 | |
| concepts[field].fos:computer-and-information-sciences | source · DataCite | connector:datacite@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · DataCite | keyword-concept-rules@1.0.0 | title+description (65%) |
| created_date | source · DataCite | connector:datacite@1.0.0 | |
| description | source · DataCite | connector:datacite@1.0.0 | /data/attributes/descriptions |
| license | source · DataCite | connector:datacite@1.0.0 | /data/attributes/rightsList |
| publication_date | source · DataCite | connector:datacite@1.0.0 | /data/attributes/dates |
| title | source · DataCite | connector:datacite@1.0.0 | /data/attributes/titles/0/title |
| updated_date | source · DataCite | connector:datacite@1.0.0 |