Omics · study · 2026
Identification of novel vulnerable antimalarial targets
Listed in NCBI GEO
To counter the threat of drug resistant malaria parasites, drug discovery efforts should be focused on compounds with novel modes of action.
Description
Furthermore, drug candidates acting on vulnerable targets should be triaged as they are most likely to be fast-acting antimalarials and have a lower propensity to resistance. Vulnerable targets can be validated by phenotypic assessment of conditional loss of function mutants.
Here, we created mutants for 17 genes with the glmS ribozyme tool. Target knockdown was assessed by RNA-seq and western blotting. Target vulnerability assay of the mutants identified MDR1, UGT1, DHFS-FPGS, and GAT as vulnerable targets.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE280nnn/GSE280287 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE280287 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1177753 ncbi.nlm.nih.gov/bioproject/PRJNA1177753 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE280287 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |