Data · dataset · 2020
Updated results to publication “Estimation of Recombination Rate and Maternal Linkage Disequilibrium in Half-Sibs” (Fron Genet)
Listed in RADAR and RADAR4Memory — shown once because both records carry DOI 10.22000/280
In Hampel et al. (2018, Fron Genet), we proposed an advanced method for the estimation of paternal recombination rate and maternal linkage disequilibrium between pairs of SNPs if genotypes of paternal half sibs were available.
Description
To show practical usability of the approach, empirical bovine data comprising several half-sib families have been investigated. However, the outcome of our method strongly depended on the order of SNPs.
For instance, candidates of putatively misplaced SNPs were identified if recombination rate between close SNPs was unusually high. Since the bovine genome assembly has been updated to its current version ARS-UCD1.2, it was necessary to re-analyse the data. The parameter estimates as well as the input data are now jointly available from this repository.
Read the rest (1 more)
More details about the methodology can be found in Hampel et al. (2018, Fron Genet), doi.org/10.3389/fgene.2018.00186.
Links
Where it is published
- DOI doi.org/10.22000/280 ↗
DOI / persistent id · from radar service eu de
Catalogue records · 1
- OAI-PMH record radar-service.eu/oai/OAIHandler?verb=GetRecord&metadataPrefix=oai_dc&identifier… ↗
metadata API · from radar service eu de
Topics
- From keywords
- Earth & Environmental Science · Earth & Environmental Science · Genetics · Genetics · Life Sciences · Life Sciences
Provenance · 2 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| RADAR | 10.22000/280 | 10 d ago | JSON v1 |
| RADAR4Memory | 10.22000/280 | 10 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · radar service eu de | connector:radar_service_eu_de@1.0.0 | |
| concepts[field].anzsrc:group:3105 | mapping · radar4memory radar service eu | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].anzsrc:group:3105 | mapping · radar service eu de | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].local:field:earth-environmental | mapping · radar service eu de | connector:radar_service_eu_de@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · radar4memory radar service eu | connector:radar4memory_radar_service_eu@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · radar service eu de | connector:radar_service_eu_de@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · radar4memory radar service eu | connector:radar4memory_radar_service_eu@1.0.0 | |
| description | source · radar service eu de | connector:radar_service_eu_de@1.0.0 | /metadata/dc/description |
| license | source · radar service eu de | connector:radar_service_eu_de@1.0.0 | /metadata/dc/rights |
| publication_date | source · radar service eu de | connector:radar_service_eu_de@1.0.0 | |
| title | source · radar service eu de | connector:radar_service_eu_de@1.0.0 | /metadata/dc/title |