CeNGEN scRNAseq dataset wrangled into standard WormBase anndata - 100k C. elegans cells FACS sorted for neurons in L4 larvae

CeNGEN (Taylor et al 2021) scRNAseq dataset wrangled into standard WormBase anndata 100k C. elegans cells FACS sorted to enrich for neurons - 70k cells are neurons, 30k are other types For more information about the data see the CeNGEN project website: cengen.org Preprint describing data and analysises: doi.org/10.1101/2020.12.15.422897 Molecular topography of an entire nervous system - bioRxiv 2020 Seth R Taylor, Gabriel Santpere, Alexis Weinreb, Alec Barrett, Molly B. Reilly, Chuan Xu, Erdem Varol, Panos Oikonomou, Lori Glenwinkel, Rebecca McWhirter, Abigail Poff, Manasa Basavaraju, Ibnul Rafi, Eviatar Yemini, Steven J Cook, Alexander Abrams, Berta Vidal, Cyril Cros, Saeed Tavazoie, Nenad Sestan, Marc Hammarlund, View ORCID ProfileOliver Hobert, David M. Miller III The file `cengen_author_provided_matrices.zip` contains the original mtx files provided by the authors as outputted by CellRanger, both filtered and unfiltered.

The file `taylor2020.h5ad` contains those matrices and the metadata from the 2020 cengen data release wrangled into the WormBase standard format, which is described at: github.com/WormBase/anndata-wrangling/