Dataset containing Pyrenophora tritici-repentis (isolate M4) RNA-seq analysis of in vitro samples and in planta samples during wheat tan spot infection

The data were generated as part of a study which used RNA sequencing to generate transcriptional datasets for wheat (Triticum aestivum) and the pathogen Pyrenophora tritici-repentis (a causal agent of tan spot) during the infection and in vitro pathogen growth stages. The data consists of the following files: Data file 1.xlsx: Table of RNA sample collections and statistics for both Triticum aestivum and Pyrenophora tritici-repentis.

Four sample IDs for each are provided, with Source Tissue, Condition, Sample (Days Post Leaf-Inoculation), Read Pair, Reference, Read pair alignment, Percent read pair alignment and Genes for each sample. Data file 2.xlsx: Wheat gene expression 3 and 4 days post infection, with variables Gene ID, Locus, Status, Control (FPKM), Infection (FPKM) and log2(fold_change). Data file 3.xlsx: Pyrenophora tritici-repentis gene expression in planta at days 3 and 4 post infection. 9093 GenBank accession numbers are included with variables Genome position in planta 3 days post infection (FPKM), in planta 4 days post infection (FPKM), log2 (fold change), M4 Gene description and Effectorp probability.