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Data · dataset · 2020

BRCA1-null versus BRCA1 hypermethylated TNBC

Listed in Teesside University Research Data Repository

Uploaded data include: 1.

Description

Frequencies of copy number gain and loss, LOH, and copy neutral LOH for 57 BRCA1 hypermethylated and 52 BRCA1-null tumors. 2. RNAseq data for 27 ER- and PR-negative BRCA1 germline cases originally reported by Jönsson et al. (PMID=22706203) as GSE25307.

RNAseq data was generated and summarized to FPKM as described in Brueffer et al. (JCO Precision Oncology, 1-18 (2018).).

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Where it is published

Catalogue records · 1

Topics

From keywords
Earth & Environmental Science · Gene expression
Inferred from text
RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
SourceKeyLast seenRaw
Teesside University Research Data Repositoryoai:data.mendeley.com/2dbh285999.116 h agoJSON v1
FieldAssertionExtractorEvidence
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concepts[field].local:field:earth-environmentalmapping · researchdata tees ac ukconnector:researchdata_tees_ac_uk@1.0.0
concepts[modality].local:modality:rna-seqenrichment · researchdata tees ac ukkeyword-concept-rules@1.0.0title+description (65%)
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